Topoisomerases are enzymes that regulate the overwinding or underwinding of DNA. The winding problem of DNA arises due to the intertwined nature of its double-helical structure. Topoisomerases are isomerase enzymes that act on the topology of DNA. Type I topoisomerase cuts one strand of a DNA double helix, relaxation occurs, and then the cut strand is reannealed. Type I topoisomerases are subdivided into two subclasses: type IA topoisomerases, which share many structural and mechanistic features with the type II topoisomerases, and type IB topoisomerases, which utilize a controlled rotary mechanism. Type II topoisomerase cuts both strands of one DNA double helix, pass another unbroken DNA helix through it, and then reanneal the cut strands. This class is also split into two subclasses: type IIA and type IIB topoisomerases, which possess similar structure and mechanisms.


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HEPARIN, SODIUM, LOW MOLECULAR WEIGHT

ICRF-193 is an TopoII inhibitor. (S,S)- and (R,R)-isomers ICRF-193 make up an racemic mixture, ICRF-196 (HY-118590A). ICRF-196 can be used for the research of cancer[1].

  • CAS Number: 21416-88-6
  • MF: C12H18N4O4
  • MW: 282.30
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

ARN24139

ARN24139(compound 3f) is a topoisomerase II (topoII) inhibitor with the IC50 of 7.3 μM. ARN24139 can inhibit cancer cell proliferation and is well tolerated in vivo[1].

  • CAS Number: 2699768-78-8
  • MF: C24H16F3N3O4S
  • MW: 499.46
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Hippeastrine

Hippeastrine, an active alkaloid, exhibits a good dose-dependent inhibitory effect against topoisomerase I (Top I) with an IC50 at 7.25 μg/mL. Antiproliferative and anticancer activities[1].

  • CAS Number: 477-17-8
  • MF: C17H17NO5
  • MW: 315.32100
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Chimmitecan

Chimmitecan ((S)-9-Allyl-10-Hydroxycamptothecin), a novel 9-small-alkyl-substituted lipophilic Camptothecin (HY-16560), is a potent inhibitor of topoisomerase I. Chimmitecan exhibits anticancer activity[1].

  • CAS Number: 185425-25-6
  • MF: C23H20N2O5
  • MW: 404.42
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

4-[(3β)-Cholest-5-en-3-yloxy]-4-oxobutanoic acid

Cholesteryl hemisuccinate is a with hepatoprotective an anticancer activity. Cholesteryl hemisuccinate inhibits Acetaminophen (AAP, HY-66005) hepatotoxicity, and prevents AAP-induced hepatic apoptosis and necrosis. Cholesteryl hemisuccinate inhibits DNA polymerase and DNA topoisomerase to inhibit DNA replication and repair and cell division. Thus, Cholesteryl hemisuccinate inhibits tumor growth[1][2].

  • CAS Number: 1510-21-0
  • MF: C31H50O4
  • MW: 486.73
  • Catalog: Apoptosis
  • Density: 1.1±0.1 g/cm3
  • Boiling Point: 586.0±43.0 °C at 760 mmHg
  • Melting Point: 178 °C
  • Flash Point: 179.6±21.7 °C

(S)-10-hydroxycamptothecin

(±)-10-Hydroxycamptothecin, an indole alkaloid isolated from Camptotheca acuminate, inhibits the activity of topoisomerase I and has a broad spectrum of anticancer activity.

  • CAS Number: 64439-81-2
  • MF: C20H16N2O5
  • MW: 364.351
  • Catalog: Topoisomerase
  • Density: 1.6±0.1 g/cm3
  • Boiling Point: 820.7±65.0 °C at 760 mmHg
  • Melting Point: 230-237°C
  • Flash Point: 450.1±34.3 °C

Gly-Cyclopropane-Exatecan

Gly-Cyclopropane-Exatecan involves in the synthesis of anti-B7-H4 ADC, containing Exatecan (HY-13631), a DNA Topoisomerase I inhibitor. Gly-Cyclopropane-Exatecan participated in the formation of the ADC hu2F7-Exatecan (compound 34), which showed antitumor activity in vivo and in vitro[1].

  • CAS Number: 2414254-49-0
  • MF: C32H34FN5O7
  • MW: 619.64
  • Catalog: ADC Cytotoxin
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Topoisomerase IIα-IN-2

Topoisomerase IIα-IN-2 (compound 5) is a potent DNA-binding ligands and topoisomerase IIα inhibitor. Topoisomerase IIα-IN-2 exhibits high antiproliferative activity against human cancer cell lines. Topoisomerase IIα-IN-2 significantly induces DNA damage and arrests cancer cells at G2/M phase[1].

  • CAS Number: 2407521-90-6
  • MF: C22H20N4O5
  • MW: 420.42
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

N,N’-(3-Fluoro-4-Methyl-8-Oxo-5,6,7,8-Tetrahydronaphthalene-1,7-Diyl)Diacetamide

Exatecan Intermediate 5 is the intermediate of Exatecan (HY-13631) And Exatecan (DX-8951) is a DNA topoisomerase I inhibitor with an IC50 value of 2.2 μM (0.975 μg/mL) that can be used in cancer research. Exatecan Intermediate 5 can be used to synthesize Antibody-Drug Conjugates (ADCs).

  • CAS Number: 143655-70-3
  • MF: C15H17FN2O3
  • MW: 292.31
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Becatecarin

Becatecarin is a rebeccamycin analog with antitumor effects. Becatecarin intercalates into DNA and inhibites the catalytic activity of topoisomerases I/II.

  • CAS Number: 119673-08-4
  • MF: C33H34Cl2N4O7
  • MW: 669.552
  • Catalog: Topoisomerase
  • Density: 1.6±0.1 g/cm3
  • Boiling Point: 848.8±65.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 467.2±34.3 °C

EGFR-IN-57

EGFR-IN-57 (Compound 25a) is a potent, orally active EGFR-TK inhibitor with an IC50 of 0.054 µM. EGFR-IN-57 also inhibits VEGFR-2, CK2α, topoisomerase IIβ and tubulin polymerization with IC50 values of 0.087, 0.171, 0.13 and 3.61 µM, respectively. EGFR-IN-57 induces cell cycle arrest at G2/M and pre-G1 phases. EGFR-IN-57 induces cancer cell apoptosis[1].

  • CAS Number: 2492382-37-1
  • MF: C22H15N3O2S
  • MW: 385.44
  • Catalog: Apoptosis
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

CL2-MMT-SN38

CL2-MMT-SN38 is a SN-38 derivative. SN-38, an anticancer agent, is an active metabolite of the Topoisomerase I inhibitor Irinotecan (CPT-11)[1].

  • CAS Number: 1084888-82-3
  • MF: C102H122N12O24
  • MW: 1900.13
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Artemisitene

Artemisitene, a natural derivative of Artemisinin, is a Nrf2 activator with antioxidant and anticancer activities. Artemisitene activates Nrf2 by decreasing Nrf2 ubiquitination and increasing its stability[1][2].

  • CAS Number: 101020-89-7
  • MF: C15H20O5
  • MW: 280.32
  • Catalog: Apoptosis
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: 160-162°C (lit.)
  • Flash Point: N/A

Irinotecan-d10 (hydrochloride)

Irinotecan-d10 ((+)-Irinotecan-d10) hydrochloride is the deuterium labeled Irinotecan. Irinotecan ((+)-Irinotecan) is a topoisomerase I inhibitor, preventing religation of the DNA strand by binding to topoisomerase I-DNA complex[1][2].

  • CAS Number: 718612-62-5
  • MF: C33H29D10ClN4O6
  • MW: 633.201
  • Catalog: Autophagy
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

4-(2,4-Dichlorophenyl)-1,4-dihydro-[1,3,5]triazino[1,2-a]benzimidazol-2-amine

Topoisomerase II inhibitor 14 (compound 2f) is a potent inhibtor of Topoisomerase II, with anticancer activity. Topoisomerase II inhibitor 14 induces apoptosis, and arrests cell cycle at S phase. Topoisomerase II inhibitor 14 exhibits antioxidant effect and decreases the level of GSH, MDA, and NO[1].

  • CAS Number: 305343-00-4
  • MF: C15H11Cl2N5
  • MW: 332.19
  • Catalog: Apoptosis
  • Density: 1.7±0.1 g/cm3
  • Boiling Point: 493.6±55.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 252.3±31.5 °C

Guajadial C

Guajadial C is a Top1 catalytic inhibitor that delays Top1 poison-mediated DNA damage. Guajadial C shows cytotoxicity against cancer cells[1].

  • CAS Number: 1529775-02-7
  • MF: C30H34O5
  • MW: 474.588
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Topoisomerase II inhibitor 15

Topoisomerase II inhibitor 15 (compound 2g) is a Topoisomerase II inhibitor. Topoisomerase II inhibitor 15 potently is an apoptotic inducer with greater selectivity against head and neck tumors[1].

  • CAS Number: 451516-79-3
  • MF: C15H11Cl2N5
  • MW: 332.19
  • Catalog: Apoptosis
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Nalidixic acid sodium salt

Nalidixic acid sodium salt, a quinolone antibiotic, is effective against both gram-positive and gram-negative bacteria. Nalidixic acid acts in a bacteriostatic manner in lower concentrations and is bactericidal in higher concentrations. Nalidixic acid inhibits a subunit of DNA gyrase and topoisomerase IV and reversibly blocks DNA replication in susceptible bacteria[1][2].

  • CAS Number: 3374-05-8
  • MF: C12H11N2NaO3
  • MW: 254.21700
  • Catalog: Bacterial
  • Density: 1.331g/cm3
  • Boiling Point: 413.1ºC at 760mmHg
  • Melting Point: 229-230ºC
  • Flash Point: 203.6ºC

Heliquinomycin

Heliquinomycin is an inhibitor of DNA helicase (Ki: 6.8 μM) and inhibits DNA and RNA synthesis. Heliquinomycin is effective against Gram-positive bacteria strains. Heliquinomycin inhibits cancer cell growth[1][2].

  • CAS Number: 178182-49-5
  • MF: C33H30O17
  • MW: 698.58100
  • Catalog: Bacterial
  • Density: 1.72g/cm3
  • Boiling Point: 966ºC at 760mmHg
  • Melting Point: N/A
  • Flash Point: 310.6ºC

Campathecin

Campathecin is a potent DNA enzyme topoisomerase I inhibitor, with an IC50 of 679 nM.

  • CAS Number: 7689-03-4
  • MF: C20H16N2O4
  • MW: 348.352
  • Catalog: ADC Cytotoxin
  • Density: 1.5±0.1 g/cm3
  • Boiling Point: 757.0±60.0 °C at 760 mmHg
  • Melting Point: 260 °C (dec.)(lit.)
  • Flash Point: 411.6±32.9 °C

AT-1727

Bimolane (AT-1727), a human topoisomerase II inhibitor, can be used as an anti-neoplastic agent and for the research of psoriasis. Bimolane shows leukemogenic activity and induces multiple types of chromosomal aberrations in human lymphocytes[1][2].

  • CAS Number: 74550-97-3
  • MF: C20H32N6O6
  • MW: 452.50
  • Catalog: Topoisomerase
  • Density: 1.326g/cm3
  • Boiling Point: 679.2ºC at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 364.6ºC

Gatifloxacin sesquihydrate

Gatifloxacin sesquihydrate (AM-1155; BMS-206584; PD135432) is a potent fluoroquinolone antibiotic with broad-spectrum antibacterial activity. Gatifloxacin sesquihydrate inhibits bacterial type II topoisomerases (IC50=13.8 μg/ml for S. aureus topoisomerase IV) and E. coli DNA gyrase (IC50 = 0.109 μg/ml)[1]. Gatifloxacin sesquihydrate can be used to treat bacterial conjunctivitis in vivo.

  • CAS Number: 180200-66-2
  • MF: C19H22FN3O4.3/2H2O
  • MW: 804.834
  • Catalog: Bacterial
  • Density: 1.386 g/cm3
  • Boiling Point: 607.8ºC at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 321.4ºC

Diflomotecan

Diflomotecan (BN 80915) is a potent inhibitor of topoisomerase I. Diflomotecan causes enhanced plasma stability and has the superior preclinical anti-tumour activity compared with other established compounds[1].

  • CAS Number: 220997-97-7
  • MF: C21H16F2N2O4
  • MW: 398.359
  • Catalog: Topoisomerase
  • Density: 1.6±0.1 g/cm3
  • Boiling Point: 784.2±60.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 428.1±32.9 °C

Etoposide 4'-Phosphate

Etoposide phosphate (BMY-40481) is a potent anti-cancer chemotherapy agent and a selective topoisomerase II inhibitor to prevent re-ligation of DNA strands. Etoposide phosphate is the phosphate ester prodrug of etoposide and is considered as active equivalent to Etoposide. Etoposide phosphate induces cell cycle arrest, apoptosis, and autophagy[1][2].

  • CAS Number: 117091-64-2
  • MF: C29H33O16P
  • MW: 666.522
  • Catalog: Apoptosis
  • Density: 1.55 g/cm3
  • Boiling Point: 907.7±75.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 502.7±37.1 °C

Aurintricarboxylic acid

Aurintricarboxylic acid is a nanomolar-potency, allosteric antagonist with selectivity towards αβ-methylene-ATP-sensitive P2X1Rs and P2X3Rs, with IC50s of 8.6 nM and 72.9 nM for rP2X1R and rP2X3R, respectively[1]. Aurintricarboxylic acid is a potent anti-influenza agent by directly inhibiting the neuraminidase[2]. Aurintricarboxylic acid is an inhibitor of topoisomerase II and apoptosis[3]. Aurintricarboxylic acid is a selective inhibitor of the TWEAK-Fn14 signaling pathway[4].

  • CAS Number: 4431-00-9
  • MF: C22H14O9
  • MW: 422.341
  • Catalog: Influenza Virus
  • Density: 1.6±0.1 g/cm3
  • Boiling Point: 759.6±60.0 °C at 760 mmHg
  • Melting Point: 300 °C(lit.)
  • Flash Point: 427.1±29.4 °C

Elomotecan hydrochloride

Elomotecan (hydrochloride) is a potent inhibitor of topoisomerases I and II. Elomotecan (hydrochloride) is a camptothecin analog belonging to the homocamptothecin family (hCPT). Elomotecan (hydrochloride) reduces the proliferation of different tumor cells with higher potency than other anticancer drugs of reference targeting topoisomerases I or II[1].

  • CAS Number: 220997-99-9
  • MF: C29H33Cl2N3O4
  • MW: 558.50
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Irinotecan-d10

Irinotecan-d10 ((+)-Irinotecan-d10) is a deuterium labeled Irinotecan ((+)-Irinotecan). Irinotecan ((+)-Irinotecan) is a topoisomerase I inhibitor, preventing religation of the DNA strand by binding to topoisomerase I-DNA complex[1].

  • CAS Number: 718613-28-6
  • MF: C33H28D10N4O6
  • MW: 596.74
  • Catalog: Autophagy
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Betulinic acid

Betulinic acid is a natural pentacyclic triterpenoid, acts as a eukaryotic topoisomerase I inhibitor, with an IC50 of 5 μM, and possesses anti-HIV, anti-malarial, anti-inflammatory and anti-tumor properties.

  • CAS Number: 472-15-1
  • MF: C30H48O3
  • MW: 456.700
  • Catalog: HIV
  • Density: 1.1±0.1 g/cm3
  • Boiling Point: 550.0±33.0 °C at 760 mmHg
  • Melting Point: 295-298 °C (dec.)(lit.)
  • Flash Point: 300.5±21.9 °C

7-Ethyl-10-(4-N-aminopentanoic acid)-1-piperidino)carbonyloxycamptothecin

RPR121056 (APC) is a metabolite of Irinotecan (CPT-11), which is generated by CYP3A4. Irinotecan (CPT-11) is an antineoplastic agent that inhibits topoisomerase type I, causing cell death, and is widely used in the treatment of colorectal cancer. Irinotecan also directly inhibits AChE[1].

  • CAS Number: 181467-56-1
  • MF: C33H38N4O8
  • MW: 618.677
  • Catalog: Topoisomerase
  • Density: 1.4±0.1 g/cm3
  • Boiling Point: 953.5±65.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 530.5±34.3 °C

AZD5099

AZD5099, an antibacterial agent, is a potent and selective bacterial topoisomerase II inhibitor. AZD5099 potently inhibits the infections caused by Gram-positive and fastidious Gram-negative bacteria[1].

  • CAS Number: 907543-25-3
  • MF: C21H27Cl2N5O6S
  • MW: 548.44
  • Catalog: Bacterial
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A