Topoisomerases are enzymes that regulate the overwinding or underwinding of DNA. The winding problem of DNA arises due to the intertwined nature of its double-helical structure. Topoisomerases are isomerase enzymes that act on the topology of DNA. Type I topoisomerase cuts one strand of a DNA double helix, relaxation occurs, and then the cut strand is reannealed. Type I topoisomerases are subdivided into two subclasses: type IA topoisomerases, which share many structural and mechanistic features with the type II topoisomerases, and type IB topoisomerases, which utilize a controlled rotary mechanism. Type II topoisomerase cuts both strands of one DNA double helix, pass another unbroken DNA helix through it, and then reanneal the cut strands. This class is also split into two subclasses: type IIA and type IIB topoisomerases, which possess similar structure and mechanisms.


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XR-5000

DACA inhibits two essential nuclear enzymes in vitro, DNA topoisomerase I and DNA topoisomerase (topo) II. DACA stabilises topo I, topo II alpha, and topo II beta cleavable complexes in human leukaemia CCRF-CEM cells[1].

  • CAS Number: 89459-25-6
  • MF: C18H19N3O
  • MW: 293.36300
  • Catalog: Topoisomerase
  • Density: 1.182g/cm3
  • Boiling Point: 544.1ºC at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 282.9ºC

Mauritianin

Mauritianin is a kaempferol glycoside isolated from the flowers and leaves of Acalypha indica. Mauritianin is a topoisomerase I inhibitor[1][2].

  • CAS Number: 109008-28-8
  • MF: C33H40O19
  • MW: 740.65900
  • Catalog: Topoisomerase
  • Density: 1.74g/cm3
  • Boiling Point: 1051ºC at 760mmHg
  • Melting Point: N/A
  • Flash Point: 331.4ºC

Luotonin A

Luotonin A is an antiviral and antiphytopathogenic fungus agent. Luotonin A has good antiviral activity against tobacco mosaic virus (TMV). Luotonin A also has certain inhibitory activity on topoisomerase I and topoisomerase II. Luotonin A shows antitumor activity[1][2].

  • CAS Number: 205989-12-4
  • MF: C18H11N3O
  • MW: 285.30
  • Catalog: Fungal
  • Density: 1.4±0.1 g/cm3
  • Boiling Point: 530.9±60.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 274.9±32.9 °C

Antitumor agent-63

Antitumor agent-63 (Compound 40), a 20 (S)-O-linked camptothecin (CPT) glycoconjugate, is an antitumor agent without toxicity towards normal cells. Antitumor agent-63 shows high stability and very weak direct topoisomerase I (Topo I) inhibition[1].

  • CAS Number: 1627600-90-1
  • MF: C38H46N4O18
  • MW: 846.79
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Nitidine chloride

Nitidine chloride, a potential anti-malarial lead compound derived from Zanthoxylum nitidum (Roxb) DC, exerts potent anticancer activity through diverse pathways, including inducing apoptosis, inhibiting STAT3 signaling cascade, DNA topoisomerase 1 and 2A, ERK and c-Src/FAK associated signaling pathway. Nitidine chloride inhibits LPS-induced inflammatory cytokines production via MAPK and NF-kB pathway[1][2][3][4][5][6].

  • CAS Number: 13063-04-2
  • MF: C21H18ClNO4
  • MW: 383.825
  • Catalog: Apoptosis
  • Density: 1.35g/cm3
  • Boiling Point: 619ºC at 760 mmHg
  • Melting Point: 281-282ºC
  • Flash Point: 189.4ºC

N,N’-(3-Fluoro-4-Methyl-8-Oxo-5,6,7,8-Tetrahydronaphthalene-1,7-Diyl)Diacetamide

Exatecan Intermediate 5 is the intermediate of Exatecan (HY-13631) And Exatecan (DX-8951) is a DNA topoisomerase I inhibitor with an IC50 value of 2.2 μM (0.975 μg/mL) that can be used in cancer research. Exatecan Intermediate 5 can be used to synthesize Antibody-Drug Conjugates (ADCs).

  • CAS Number: 143655-70-3
  • MF: C15H17FN2O3
  • MW: 292.31
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

MC-DOXHZN hydrochloride

MC-DOXHZN hydrochloride is an albumin-binding prodrug of Doxorubicin, with acid-sensitive properties[1].

  • CAS Number: 480998-12-7
  • MF: C37H43ClN4O13
  • MW: 787.21
  • Catalog: ADC Cytotoxin
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Amsacrine

Amsacrine is an inhibitor of topoisomerase II, and acts as an antineoplastic agent which can intercalates into the DNA of tumor cells.

  • CAS Number: 51264-14-3
  • MF: C21H19N3O3S
  • MW: 393.459
  • Catalog: Autophagy
  • Density: 1.4±0.1 g/cm3
  • Boiling Point: 563.0±60.0 °C at 760 mmHg
  • Melting Point: 230-240ºC
  • Flash Point: 294.3±32.9 °C

Levofloxacin hydrochloride

Levofloxacin ((-)-Ofloxacin) hydrochloride is an orally active antibiotic and is active against both Gram-positive and Gram-negative bacteria. Levofloxacin hydrochloride inhibits the DNA gyrase and topoisomerase IV. Levofloxacin hydrochloride can be used for chronic periodontitis, airway inflammation and BK Viremia research[1][2][3][4].

  • CAS Number: 177325-13-2
  • MF: C18H21ClFN3O4
  • MW: 397.828
  • Catalog: Bacterial
  • Density: N/A
  • Boiling Point: 571.5ºC at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 299.4ºC

CL-216942

Bisantrene dihydrochloride is a highly effective antitumor agent, it exerts its cytotoxicity by affecting DNA intercalation. Bisantrene dihydrochloride targets eukaryotic type II topoisomerases. Bisantrene dihydrochloride is a substrate of MDR1[1][2][3][4].

  • CAS Number: 71439-68-4
  • MF: C22H23ClN8
  • MW: 434.92500
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: 646.3ºC at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 344.7ºC

PluriSIn #2

PluriSIn #2 is a selective transcriptional inhibitor of topoisomerase II α (TOP2A). PluriSIn #2 is a compound that selectively eliminates undifferentiated human pluripotent stem cells (hPSCs)[1].

  • CAS Number: 56563-17-8
  • MF: C11H8FN3O3
  • MW: 249.19800
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Type II topoisomerase inhibitor 1

Type II topoisomerase inhibitor 1 is a potent and selective E. coli DNA gyrase inhibitor (IC50: 1.7 nM), and forms hydrogen bonds with Asp73 residue. Type II topoisomerase inhibitor 1 inhibits topoisomerase IV activity (IC50: 0.98 μM). Type II topoisomerase inhibitor 1 can be used in the research of antibacterial area[1][2].

  • CAS Number: 2245691-60-3
  • MF: C18H15N3O4
  • MW: 337.33
  • Catalog: Bacterial
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Becatecarin

Becatecarin is a rebeccamycin analog with antitumor effects. Becatecarin intercalates into DNA and inhibites the catalytic activity of topoisomerases I/II.

  • CAS Number: 119673-08-4
  • MF: C33H34Cl2N4O7
  • MW: 669.552
  • Catalog: Topoisomerase
  • Density: 1.6±0.1 g/cm3
  • Boiling Point: 848.8±65.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 467.2±34.3 °C

EGFR-IN-57

EGFR-IN-57 (Compound 25a) is a potent, orally active EGFR-TK inhibitor with an IC50 of 0.054 µM. EGFR-IN-57 also inhibits VEGFR-2, CK2α, topoisomerase IIβ and tubulin polymerization with IC50 values of 0.087, 0.171, 0.13 and 3.61 µM, respectively. EGFR-IN-57 induces cell cycle arrest at G2/M and pre-G1 phases. EGFR-IN-57 induces cancer cell apoptosis[1].

  • CAS Number: 2492382-37-1
  • MF: C22H15N3O2S
  • MW: 385.44
  • Catalog: Apoptosis
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

9-Methoxycamptothecine

9-Methoxycamptothecin (MCPT), isolated from Nothapodytes foetida, has antitumor activities through topoisomerase inhibition. 9-Methoxycamptothecin (MCPT) induces strong G2/M arrest and apoptosis in cancer[1][2].

  • CAS Number: 39026-92-1
  • MF: C21H18N2O5
  • MW: 378.378
  • Catalog: Apoptosis
  • Density: 1.5±0.1 g/cm3
  • Boiling Point: 773.1±60.0 °C at 760 mmHg
  • Melting Point: 223-225 ºC
  • Flash Point: 421.4±32.9 °C

Alternariol

Alternariol is a mycotoxin produced by Alternaria species. AOH inhibits the catalytic activity of topoisomerase I and topoisomerase II enzymes[1]. Alternariol exhibits a variety of therapeutic and biological properties such as phytotoxicity, cytotoxicity, anti-HIV, anti-cancer, and anti-microbial properties[2].

  • CAS Number: 641-38-3
  • MF: C14H10O5
  • MW: 258.226
  • Catalog: Topoisomerase
  • Density: 1.6±0.1 g/cm3
  • Boiling Point: 586.9±39.0 °C at 760 mmHg
  • Melting Point: 350°C (rough estimate)
  • Flash Point: 232.3±20.6 °C

Phenoxodiol

Phenoxodiol, a synthetic analog of Genestein, activates the mitochondrial caspase system, inhibits XIAP (an apoptosis inhibitor), and sensitizes the cancer cells to Fas-mediated apoptosis. This agent also inhibits DNA topoisomerase II by stabilizing the cleavable complex. Phenoxodiol induces cell cycle arrest in the G1/S phase of the cell cycle and upregulates p21WAF1 via a p53 independent manner[1][2].

  • CAS Number: 81267-65-4
  • MF: C15H12O3
  • MW: 240.254
  • Catalog: Apoptosis
  • Density: 1.3±0.1 g/cm3
  • Boiling Point: 463.7±45.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 234.3±28.7 °C

Indotecan(LMP400)

Indotecan (LMP-400) is a potent topoisomerase 1(Top1) inhibitor with IC50 values of 300, 1200, 560 nM for P388, HCT116, MCF-7 cell lines, respectively.

  • CAS Number: 915303-09-2
  • MF: C26H26N2O7
  • MW: 478.49400
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

SN-38-d5

SN-38-d5 is deuterium labeled SN-38. SN-38 (NK012) is an active metabolite of the Topoisomerase I inhibitor Irinotecan. SN-38 (NK012) inhibits DNA and RNA synthesis with IC50s of 0.077 and 1.3 μM, respectively[1][2][3][4].

  • CAS Number: 718612-51-2
  • MF: C22H15D5N2O5
  • MW: 397.44
  • Catalog: ADC Cytotoxin
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Topoisomerase II inhibitor 12

Topoisomerase II inhibitor 12 (Compound 8c) is a topoisomerase II (topo II) inhibitor, working as a DNA non-intercalator. Topoisomerase II inhibitor 12 shows antineoplastic activity[1].

  • CAS Number: 2304527-20-4
  • MF: C40H63N3O4
  • MW: 649.95
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

(1S,9R)-Exatecan mesylate

(1S,9R)-Exatecan mesylate ((1S,9R)-DX8951f) is an isomer of Exatecan mesylate (HY-13631A). Exatecan mesylate (DX8951f) is an inhibitor of DNA topoisomerase I with an IC50 of 2.2 μM (0.975 μg/mL) and can be used in cancer research[1].

  • CAS Number: 2938875-54-6
  • MF: C25H26FN3O7S
  • MW: 531.55
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Lurtotecan

Lurtotecan (GI147211; OSI-211), a semisynthetic Camptothecin analog, is a topoisomerase I inhibitor. Lurtotecan has anticancer effects[1].

  • CAS Number: 149882-10-0
  • MF: C28H30N4O6
  • MW: 518.56100
  • Catalog: Topoisomerase
  • Density: 1.5g/cm3
  • Boiling Point: 844.8ºC at 760mmHg
  • Melting Point: N/A
  • Flash Point: 464.7ºC

BNS-22

BNS-22 is a DNA topoisomerase II (TOP2) catalytic inhibitor with the IC50 values of 2.8 μM and 0.42 μM for human TOP2α and TOP2β, respectively. BNS-22 induces abnormal division and has anti-proliferative activity[1].

  • CAS Number: 1151668-24-4
  • MF: C24H25NO5
  • MW: 407.459
  • Catalog: Topoisomerase
  • Density: 1.2±0.1 g/cm3
  • Boiling Point: 622.7±55.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 330.4±31.5 °C

Camptothecin-20(S)-O-propionate

Camptothecin-20(S)-O-propionate (CZ48), the C20-propionate ester of CPT, is a highly effective anticancer agent. Camptothecin-20(S)-O-propionate (CZ48) is a topoisomerase-Ι inhibitor[1][2][3].

  • CAS Number: 194414-69-2
  • MF: C23H20N2O5
  • MW: 404.41500
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Daunorubicin citrate

Daunorubicin (Daunomycin) citrate is a topoisomerase II inhibitor with potent anti-tumor activity. Daunorubicin citrate inhibits DNA and RNA synthesis. Daunorubicin citrate is a cytotoxin that inhibits cancer cell viability and induces apoptosis and necrosis. Daunorubicin citrate is also an anthracycline antibiotic. Daunorubicin citrate can be used in the research of infection and variety of cancers, including leukemia, non-Hodgkin lymphomas, Ewing's sarcoma, Wilms' tumor[1][2][4][5].

  • CAS Number: 1884557-85-0
  • MF: C33H37NO17
  • MW: 719.64
  • Catalog: Bacterial
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Topoisomerase II inhibitor 8

Topoisomerase II inhibitor 8 (compound 22) is a potent topoisomerase II inhibitor, with an IC50 of 0.52 μM. Topoisomerase II inhibitor 8 exhibits good anti-proliferative activities and can arrest the cell cycle at G2/M phase[1].

  • CAS Number: 2493298-68-1
  • MF: C14H8N4O3S
  • MW: 312.30
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Groenlandicine

Groenlandicine is a protoberberine alkaloid isolated from Coptidis Rhizoma. Groenlandicine exhibits moderate inhibitory effect with IC50 value of 154.2 μM for human recombinant aldose reductase (HRAR)[1]. Groenlandicine selectively induces topoisomerase I-mediated DNA cleavage[2].

  • CAS Number: 38691-95-1
  • MF: C19H16NO4+
  • MW: 321.32700
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

elomotecan

Elomotecan (BN 80927 free base) is a potent inhibitor of topoisomerases I and II. Elomotecan is a camptothecin analog belonging to the homocamptothecin family (hCPT). Elomotecan reduces the proliferation of different tumor cells with higher potency than other anticancer drugs of reference targeting topoisomerases I and II[1].

  • CAS Number: 220998-10-7
  • MF: C29H32ClN3O4
  • MW: 522.035
  • Catalog: Topoisomerase
  • Density: 1.4±0.1 g/cm3
  • Boiling Point: 821.3±65.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 450.5±34.3 °C

n-(9-fluorenylmethoxycarbonyl)-l-leucin&

Fmoc-leucine-15N is a 15N-labeled and 13C-labled EIDD-1931. EIDD-1931 (Beta-d-N4-hydroxycytidine; NHC) is a novel nucleoside analog and behaves as a potent anti-virus agent. EIDD-1931 effectively inhibits the replication activity of venezuelan equine ence

  • CAS Number: 200937-57-1
  • MF: C21H2315NO4
  • MW: 354.41
  • Catalog: HCV
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: 152-156ºC(lit.)
  • Flash Point: N/A

CL2-MMT-SN38

CL2-MMT-SN38 is a SN-38 derivative. SN-38, an anticancer agent, is an active metabolite of the Topoisomerase I inhibitor Irinotecan (CPT-11)[1].

  • CAS Number: 1084888-82-3
  • MF: C102H122N12O24
  • MW: 1900.13
  • Catalog: Topoisomerase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A