Metabolic pathways are enzyme-mediated biochemical reactions that lead to biosynthesis (anabolism) or breakdown (catabolism) of natural product small molecules within a cell or tissue. In each pathway, enzymes catalyze the conversion of substrates into structurally similar products. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation. Metabolism maintains the living state of the cells and the organism.

Proteases are used throughout an organism for various metabolic processes. Proteases control a great variety of physiological processes that are critical for life, including the immune response, cell cycle, cell death, wound healing, food digestion, and protein and organelle recycling. On the basis of the type of the key amino acid in the active site of the protease and the mechanism of peptide bond cleavage, proteases can be classified into six groups: cysteine, serine, threonine, glutamic acid, aspartate proteases, as well as matrix metalloproteases. Proteases can not only activate proteins such as cytokines, or inactivate them such as numerous repair proteins during apoptosis, but also expose cryptic sites, such as occurs with β-secretase during amyloid precursor protein processing, shed various transmembrane proteins such as occurs with metalloproteases and cysteine proteases, or convert receptor agonists into antagonists and vice versa such as chemokine conversions carried out by metalloproteases, dipeptidyl peptidase IV and some cathepsins. In addition to the catalytic domains, a great number of proteases contain numerous additional domains or modules that substantially increase the complexity of their functions.

Imbalances in metabolic activities have been found to be critical in a number of pathologies, such as cardiovascular diseases, inflammation, cancer, and neurodegenerative diseases.

References:
[1] Turk B, et al. EMBO J. 2012 Apr 4;31(7):1630-43.
[2] Eatemadi A, et al. Biomed Pharmacother. 2017 Feb;86:221-231.


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Giripladib

Giripladib (PLA-695) is a indole-based inhibitor of cytosolic phospholipase A2 (cPLA2). Giripladib can be used for osteoarthritis and breast cancer research[1][2].

  • CAS Number: 865200-20-0
  • MF: C41H36ClF3N2O4S
  • MW: 745.25
  • Catalog: Phospholipase
  • Density: 1.29g/cm3
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

SSI-4

SSI-4 is an inhibitor of Stearoyl CoA desaturase 1 (SCD1) , which can be modified with 11C, used as a ligand to in vivo small animal PET/CT imaging of SCD1[1].

  • CAS Number: 1875084-68-6
  • MF: C19H21ClN4O3
  • MW: 388.85
  • Catalog: Stearoyl-CoA Desaturase (SCD)
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Dehydrojuncusol

Dehydrojuncusol, a potent HCV inhibitor, targets HCV NS5A and is able to inhibit RNA replication of replicons harboring resistance mutations to anti-NS5A direct-acting antivirals. Dehydrojuncusol significantly inhibits HCV infection when added after virus inoculation of HCV genotype 2a (EC50=1.35 µM)[1].

  • CAS Number: 117824-04-1
  • MF: C18H16O2
  • MW: 264.31800
  • Catalog: HCV
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

MCH-1 antagonist 1

MCH-1 antagonist 1 is a potent melanin concentrating hormone (MCH-1) antagonist with a Ki of 2.6 nM. MCH-1 antagonist 1 also inhibits CYP3A4 with an IC50 of 10 μM.

  • CAS Number: 1039825-68-7
  • MF: C25H26N4O2
  • MW: 414.50000
  • Catalog: MCHR1 (GPR24)
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

ALLM

ALLM (Calpain inhibitor II) is a potent inhibitor of calpain and cathepsin proteases. ALLM inhibits neuronal cell death and improves chronic neurological function after spinal cord injury (SCI)[1][2].

  • CAS Number: 110115-07-6
  • MF: C19H35N3O4S
  • MW: 401.564
  • Catalog: Cathepsin
  • Density: 1.1±0.1 g/cm3
  • Boiling Point: 676.5±55.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 362.9±31.5 °C

Nagilactone B

Nagilactone B, extracted from the root bark of Podocarpus nagi, is a liver X receptor (LXR) agonist.

  • CAS Number: 19891-51-1
  • MF: C19H24O7
  • MW: 364.390
  • Catalog: LXR
  • Density: 1.4±0.1 g/cm3
  • Boiling Point: 644.6±55.0 °C at 760 mmHg
  • Melting Point: 258-261℃
  • Flash Point: 233.7±25.0 °C

KT185

KT185 is an orally-bioavailable, brain-penetrant and selective ABHD6 inhibitor, with an IC50 0.21 nM in Neuro2A cells[1].

  • CAS Number: 1472640-86-0
  • MF: C32H33N5O2
  • MW: 519.64
  • Catalog: MAGL
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Isocryptotanshinone

Isocryptotanshinone is a potent signal transducer and activator of transcription 3 (STAT3) and protein tyrosine phosphatase 1B PTP1B inhibitor, with an IC50 of 56.1 μM for PTP1B.

  • CAS Number: 22550-15-8
  • MF: C19H20O3
  • MW: 296.36000
  • Catalog: STAT
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

7-[(1,4,5,6-Tetrahydro-4-methyl-6-oxopyridazin)-3-yl]-4H-1,4-benzoxazin-3(2H)-one

Bemoradan (compound 10a) is an orally active and selective canine Phosphodiesterase (PDE) fraction III inhibitor. Bemoradan is a long-acting, potent, inotropic vasodilator and a novel cardiotonic agent, and can be used in congestive heart failure research[1].

  • CAS Number: 112018-01-6
  • MF: C13H13N3O3
  • MW: 259.26
  • Catalog: Phosphodiesterase (PDE)
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

MMP-9-IN-4

MMP-9-IN-4 is a MMP-9 inhibitor (IC50: 7.46 nM) that has H-π interactions with MMP-9. MMP-9-IN-4 also inhibits AKT activity (IC50: 8.82 nM). MMP-9-IN-4 shows cell cytotoxicity and induces cell apoptosis. MMP-9-IN-4 can be used in the research of cancers[1].

  • CAS Number: 2581824-39-5
  • MF: C28H19F3N4O6
  • MW: 564.47
  • Catalog: Apoptosis
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Broussoflavonol F

Broussoflavonol F possess xanthine oxidase inhibitory activity[1].

  • CAS Number: 162558-94-3
  • MF: C25H26O6
  • MW: 422.470
  • Catalog: Xanthine Oxidase
  • Density: 1.3±0.1 g/cm3
  • Boiling Point: 640.9±55.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 218.6±25.0 °C

Polygalaxanthone III

Polygalaxanthone III is extracted from polygala tenuifolia wild, has inhibitory effect towards CYP450 enzyme. Polygalaxanthone III inhibits chlorzoxazone 6-hydroxylation catalyzed by CYP2E1 with an IC50 of 50.56 μM[1].

  • CAS Number: 162857-78-5
  • MF: C25H28O15
  • MW: 568.481
  • Catalog: Cytochrome P450
  • Density: 1.83
  • Boiling Point: 973.2±65.0 °C at 760 mmHg
  • Melting Point: 180-183℃
  • Flash Point: 327.7±27.8 °C

Betrixaban

Betrixaban is a highly potent, selective, and orally efficacious factor Xa (fXa) inhibitor with IC50 of 1.5 nM.

  • CAS Number: 330942-05-7
  • MF: C23H22ClN5O3
  • MW: 451.905
  • Catalog: Factor Xa
  • Density: 1.3±0.1 g/cm3
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Efipladib

Efipladib is a potent, selective and orally active cPLA2α inhibitor with an IC50 of 0.04 μM and a Kd of 0.067 μM[1].

  • CAS Number: 381683-94-9
  • MF: C40H35Cl3N2O4S
  • MW: 746.14
  • Catalog: Phospholipase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

IDO1/TDO-IN-3

IDO1/TDO-IN-3 is a potent inhibitor of IDO1/TDO. IDO1/TDO-IN-3 exhibits significant activities against IDO1 (IC50: 0.005 μM) and TDO (IC50: 0.004 μM). IDO1/TDO-IN-3 shows considerable in vivo anti-tumor activity and no obvious toxicity is observed[1].

  • CAS Number: 2347579-03-5
  • MF: C16H6ClF2N3O2
  • MW: 345.69
  • Catalog: Indoleamine 2,3-Dioxygenase (IDO)
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Disodium 4-methyl-2-oxo-2H-chromen-7-yl phosphate

4-Methylumbelliferyl phosphate (4-MUP) disodium, an anionic organophosphate, is a acid and alkaline phosphatase fluorogenic substrate. 4-Methylumbelliferyl phosphate disodium is also a nerve agent simulant[1][2][3].

  • CAS Number: 22919-26-2
  • MF: C10H7Na2O6P
  • MW: 300.112
  • Catalog: Phosphatase
  • Density: N/A
  • Boiling Point: 511.4ºC at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 263.1ºC

Hydroxyhomo Sildenafil

Lodenafil is a potent phosphodiesterase type 5 (PDE5) inhibitor for the treatment of erectile dysfunction (ED), with less oral bioavailability than Lodenafil carbonate[1].

  • CAS Number: 139755-85-4
  • MF: C23H32N6O5S
  • MW: 504.60200
  • Catalog: Phosphodiesterase (PDE)
  • Density: 1.42g/cm3
  • Boiling Point: 730.6ºC at 760 mmHg
  • Melting Point: 183-185 °C
  • Flash Point: 395.7ºC

Arimoclomol maleate

Arimoclomol maleate is a co-inducer of heat shock proteins (HSP).

  • CAS Number: 289893-26-1
  • MF: C18H24ClN3O7
  • MW: 429.85200
  • Catalog: HSP
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Nequinate

Nequinate, a quinoline compound, is an anticoccidial agent against cecal coccidiosis (Eimeria tenella) infections[1]. Nequinate inhibits xanthine oxidoreductase (XOD) activity[2].

  • CAS Number: 13997-19-8
  • MF: C22H23NO4
  • MW: 365.422
  • Catalog: Xanthine Oxidase
  • Density: 1.2±0.1 g/cm3
  • Boiling Point: 520.7±50.0 °C at 760 mmHg
  • Melting Point: 287.5ºC
  • Flash Point: 268.7±30.1 °C

Enasidenib

Enasidenib is an oral, potent, reversible, selective inhibitor of the IDH2 mutant enzymes, with IC50s of 100 and 400 nM against IDH2R140Q and IDH2R172K, respectively.

  • CAS Number: 1446502-11-9
  • MF: C19H17F6N7O
  • MW: 473.375
  • Catalog: Isocitrate Dehydrogenase (IDH)
  • Density: 1.5±0.1 g/cm3
  • Boiling Point: 581.0±60.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 305.2±32.9 °C

Pedalitin

Pedalitin is a inhibitor of tyrosinase(IC50=0.28 mM) and α-glucosidase(IC50=0.29 mM)[1].

  • CAS Number: 22384-63-0
  • MF: C16H12O7
  • MW: 316.26
  • Catalog: Tyrosinase
  • Density: 1.6±0.1 g/cm3
  • Boiling Point: 659.3±55.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 251.0±25.0 °C

ROC-0929

ROC-0929 (compound 13a) is a potent and selective inhibitor of secreted phospholipases A2 (sPLA2s) with an IC50 of 80 nM, specially targeting hGX. ROC-0929 inhibits the phosphorylation of ERK1/2 and p-38. Secreted phospholipases A2 (sPLA2s) are a family of disulfide-rich, Ca2+-dependent enzymes that hydrolyze the sn-2 position of glycero-phospholipids to release a fatty acid and a lysophospholipid. ROC-0929 has the potential for the treatment of inflammation related diseases[1].

  • CAS Number: 1048660-43-0
  • MF: C30H31N3O6S
  • MW: 561.65
  • Catalog: Phospholipase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

IDO1/TDO-IN-6

IDO1/TDO-IN-6 (compound 11) is a dual inhibitor of IDO1/TDO with IC50s of 2.25 and 2.89 μM, respectively. IDO1/TDO-IN-6 has inhibitory effects on IDO1 and TDO, with Ki values of 1.9 and 3.1 μM, respectively. IDO1/TDO-IN-6 can be used in cancer and immunology research[1].

  • CAS Number: 2948772-71-0
  • MF: C20H17NO5
  • MW: 351.35
  • Catalog: Indoleamine 2,3-Dioxygenase (IDO)
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

JG-98

JG-98 is an allosteric heat shock protein 70 (Hsp70) inhibitor with anti-cancer activities, which disrupts Hsp70 interaction with a co-chaperone Bag3 and affects signaling pathways important for cancer development[1][2][3].

  • CAS Number: 1456551-16-8
  • MF: C24H21Cl2N3OS3
  • MW: 534.54
  • Catalog: HSP
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

OHM1

OHM1 is a potent HIF1α mimic that binds to CH1 domain of p300/CBP with Kd of 500 nM, reduces the level of HIF1α transcriptional activity under hypoxia to that observed under normoxia at 20 uM in A549 cells; reduces the median tumor volume in murine tumor xenografts, and does not cause measurable changes in animal body weight or other signs of toxicity in tumor-bearing animals.

  • CAS Number: 1450995-09-1
  • MF: C24H42N6O5
  • MW: 494.637
  • Catalog: HIF/HIF Prolyl-Hydroxylase
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

2',2'-Dimethyl-2H,2'H-3,8'-bichromene-5',7-diol

Glabrene, an isoflavene derived from licorice root, shows estrogen-like activity. Glabrene is a tyrosinase inhibitor with an IC50 of 3.5 μM[1][2].

  • CAS Number: 60008-03-9
  • MF: C20H18O4
  • MW: 322.354
  • Catalog: Tyrosinase
  • Density: 1.3±0.1 g/cm3
  • Boiling Point: 536.3±50.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 278.2±30.1 °C

JZL184

JZL 184 is a potent and selective inhibitor of MAGL with IC50 of 8 nM and 4 μM for inhibition of MAGL and FAAH in mouse brain membranes respectively.IC50 value: 8 nM [1]Target: MAGL inhibitorin vitro: JZL184 prolongs DSE in Purkinje neurons in cerebellar slices and DSI in CA1 pyramidal neurons in hippocampal slices. JZL184 is more potent in inhibiting mouse MAGL than rat MAGL [2]. in vivo: When administered to mice at 16 mg/kg, intraperitoneally, JZL 184 reduces MAGL activity by 85%, elevates brain 2-AG levels by 8-fold, and elicits analgesic activity in a variety of pain assays that qualitatively mimics direct central cannabinoid (CB1) agonists [1]. Acute administration of JZL184 to FAAH(-/-) mice enhanced the magnitude of a subset of cannabimimetic responses, repeated JZL184 treatment led to tolerance to its antinociceptive effects, cross-tolerance to the pharmacological effects of Δ(9)-tetrahydrocannabinol, decreases in CB1 receptor agonist-stimulated guanosine 5'-O-(3-[(35)S]thio)triphosphate binding, and dependence as indicated by rimonabant-precipitated withdrawal behaviors, regardless of genotype [3].

  • CAS Number: 1101854-58-3
  • MF: C27H24N2O9
  • MW: 520.487
  • Catalog: MAGL
  • Density: 1.5±0.1 g/cm3
  • Boiling Point: 706.4±60.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 381.0±32.9 °C

Dolutegravir (GSK1349572)

Dolutegravir is a second-generation HIV integrase strand transfer inhibitor (INSTI) with an IC50 of 2.7 nM.

  • CAS Number: 1051375-16-6
  • MF: C20H19F2N3O5
  • MW: 419.379
  • Catalog: HIV
  • Density: 1.53 g/cm3
  • Boiling Point: 669.0±55.0 °C at 760 mmHg
  • Melting Point: N/A
  • Flash Point: 358.4±31.5 °C

Melittin (free acid) trifluoroacetate salt

Melittin free acid is a basic 26-amino-acid polypeptide, the major active ingredient of honeybee venom. Melittin free acid is an activator of phospholipase A2 (PLA2). Melittin free acid has broad-spectrum antifungal activity with MIC values of 0.4-60 μM. Melittin free acid hinders fungal growth by inducing cell apoptosis, repressing (1,3)-β-D-glucan synthase and participating in other pathways[1][2].

  • CAS Number: 123168-46-7
  • MF: C131H228N38O32
  • MW: 2847.448
  • Catalog: Fungal
  • Density: 1.4±0.1 g/cm3
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A

Enpp-1-IN-4

Enpp-1-IN-4 is a potent inhibitor of ectonucleotide pyrophosphatase-phosphodiesterase 1 (enpp-1). Enpp-1-IN-4 has the potential for the research of cancer diseases (extracted from patent WO2019177971A1, compound 1)[1].

  • CAS Number: 2376600-89-2
  • MF: C19H19N5O5S
  • MW: 429.45
  • Catalog: Phosphodiesterase (PDE)
  • Density: N/A
  • Boiling Point: N/A
  • Melting Point: N/A
  • Flash Point: N/A